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Commit ebbf979a authored by Cats's avatar Cats
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add parameter_meta to SortVcf

parent f66d0644
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......@@ -574,7 +574,7 @@ task SortVcf {
String memory = "24G"
String javaXmx = "8G"
String dockerImage = "quay.io/biocontainers/picard:2.20.5--0"
}
}
command {
......@@ -596,4 +596,16 @@ task SortVcf {
docker: dockerImage
memory: memory
}
parameter_meta {
vcfFiles: {description: "The VCF files to merge and sort.", category: "required"}
outputVcfPath: {description: "The location the sorted VCF files should be written to.", category: "required"}
dict: {description: "A sequence dictionary matching the VCF files.", category: "advanced"}
memory: {description: "The amount of memory this job will use.", category: "advanced"}
javaXmx: {description: "The maximum memory available to the program. Should be lower than `memory` to accommodate JVM overhead.",
category: "advanced"}
dockerImage: {description: "The docker image used for this task. Changing this may result in errors which the developers may choose not to address.",
category: "advanced"}
}
}
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