solve caching problem in bwa.wdl

9aa30710 · Ruben Vorderman · fdf3af30 · 9aa30710
Commit 9aa30710 authored 6 years ago by Ruben Vorderman
--- a/bwa.wdl
+++ b/bwa.wdl
@@ -2,7 +2,7 @@ task mem {
    String? preCommand
    File inputR1
    File? inputR2
-    String referenceFasta
+    File referenceFasta
    Array[File] indexFiles # These indexFiles need to be added, otherwise cromwell will not find them.
    String outputPath
    String? readgroup