Skip to content
Snippets Groups Projects
Commit 173bb2e6 authored by Cats's avatar Cats
Browse files

update changelog

parent ac55982a
No related branches found
No related tags found
No related merge requests found
......@@ -9,6 +9,8 @@ that users understand how the changes affect the new version.
-->
version 5.1.0-dev
---------------------------
+ The GRIDSS task will now run tabix separately if GRIDSS doesn't
produce a vcf index.
+ Added a task for SnpEff.
+ Adjusted runtime settings for sambamba Markdup.
+ Added a task for sambamba Flagstat.
......@@ -28,7 +30,7 @@ version 5.1.0-dev
+ Sage
+ VirusInterpreter
+ Added a task for VirusBreakend.
+ Added a task for GridssAnnotateVcfRepeatmasker.
+ Added a task for GridssAnnotateVcfRepeatmasker.
+ Bumped GRIDSS version to 2.12.2.
+ Adjusted GRIDSS runtime settings.
+ Added optional inputs to GRIDSS:
......@@ -147,7 +149,7 @@ version 4.0.0
+ Picard MergeVcf now uses compression level 1 by default.
+ bwa mem, bwa mem+kit and hisat2 have their samtools sort threads tweaked. The
number of threads is now related to the number of threads on the aligner.
Using more threads reduces the chance of the samtools sort pipe getting
Using more threads reduces the chance of the samtools sort pipe getting
blocked if it's full.
+ Renamed a few inputs in centrifuge.wdl, isoseq3.wdl, talon.wdl,
transcriptclean.wdl to be more descriptive.
......
0% Loading or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment