From 173bb2e6547c1fa4ee20ec5da98368522e18b887 Mon Sep 17 00:00:00 2001
From: dcats <d.cats@lumc.nl>
Date: Fri, 18 Mar 2022 12:49:26 +0100
Subject: [PATCH] update changelog

---
 CHANGELOG.md | 6 ++++--
 1 file changed, 4 insertions(+), 2 deletions(-)

diff --git a/CHANGELOG.md b/CHANGELOG.md
index 6c0db94..b028b60 100644
--- a/CHANGELOG.md
+++ b/CHANGELOG.md
@@ -9,6 +9,8 @@ that users understand how the changes affect the new version.
 -->
 version 5.1.0-dev
 ---------------------------
++ The GRIDSS task will now run tabix separately if GRIDSS doesn't
+  produce a vcf index.
 + Added a task for SnpEff.
 + Adjusted runtime settings for sambamba Markdup.
 + Added a task for sambamba Flagstat.
@@ -28,7 +30,7 @@ version 5.1.0-dev
   + Sage
   + VirusInterpreter
 + Added a task for VirusBreakend.
-+ Added a task for GridssAnnotateVcfRepeatmasker. 
++ Added a task for GridssAnnotateVcfRepeatmasker.
 + Bumped GRIDSS version to 2.12.2.
 + Adjusted GRIDSS runtime settings.
 + Added optional inputs to GRIDSS:
@@ -147,7 +149,7 @@ version 4.0.0
 + Picard MergeVcf now uses compression level 1 by default.
 + bwa mem, bwa mem+kit and hisat2 have their samtools sort threads tweaked. The
   number of threads is now related to the number of threads on the aligner.
-  Using more threads reduces the chance of the samtools sort pipe getting 
+  Using more threads reduces the chance of the samtools sort pipe getting
   blocked if it's full.
 + Renamed a few inputs in centrifuge.wdl, isoseq3.wdl, talon.wdl,
   transcriptclean.wdl to be more descriptive.
-- 
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