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Commit 0a1995df authored by Cats's avatar Cats
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try version 2.11.1 for gridss

parent 9e868dbc
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......@@ -34,7 +34,7 @@ task AnnotateInsertedSequence {
Int threads = 8
String javaXmx = "8G"
String memory = "9G"
String dockerImage = "quay.io/biocontainers/gridss:2.12.0--h270b39a_1"
String dockerImage = "quay.io/biocontainers/gridss:2.11.1--hdfd78af_1"
Int timeMinutes = 120
}
......@@ -96,7 +96,7 @@ task GRIDSS {
Int jvmHeapSizeGb = 64
Int threads = 8
Int timeMinutes = ceil(4320 / threads) + 10
String dockerImage = "quay.io/biocontainers/gridss:2.12.0--h270b39a_1"
String dockerImage = "quay.io/biocontainers/gridss:2.11.1--hdfd78af_1"
}
command {
......@@ -165,7 +165,7 @@ task GridssAnnotateVcfRepeatmasker {
String memory = "25G"
Int threads = 8
String dockerImage = "quay.io/biocontainers/gridss:2.12.0--h270b39a_1"
String dockerImage = "quay.io/biocontainers/gridss:2.11.1--hdfd78af_1"
Int timeMinutes = 1440
}
......@@ -213,7 +213,7 @@ task Virusbreakend {
String memory = "75G"
Int threads = 8
String dockerImage = "quay.io/biocontainers/gridss:2.12.0--h270b39a_1"
String dockerImage = "quay.io/biocontainers/gridss:2.11.1--hdfd78af_1"
Int timeMinutes = 180
}
......
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