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Commit febfe186 authored by Vermaat's avatar Vermaat
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Link to description extractor project page

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......@@ -17,8 +17,8 @@ F.J. Laros, with the following exceptions:
written by Gerard C.P. Schaafsma.</li>
<li>Current development and maintenance is done by Martijn
Vermaat.</li>
<li>Automatic extraction of variant descriptions is implemented by
Jonathan Vis.</li>
<li><a href="https://github.com/mutalyzer/description-extractor">Automatic
extraction of variant descriptions</a> is implemented by Jonathan Vis.</li>
</ul>
<p>
......
......@@ -25,6 +25,13 @@ testing phase, we plan to use the underlying algorithm for:
</li>
</ul>
<p>
The algorithm is implemented in
the <a href="https://github.com/mutalyzer/description-extractor">HGVS variant
description extractor</a>. To apply it on longer input sequences than accepted
on this page, you can download that package and run it locally.
</p>
<p>
Please supply a reference sequence and an observed sequence.
</p>
......@@ -37,19 +44,19 @@ Please supply a reference sequence and an observed sequence.
<div class="radio">
<label>
<input type="radio" name="reference_method" value="raw_method" class="input-select" data-context="select-form1" data-for="reference_raw_method" {{ 'checked' if reference_method == 'raw_method' or not reference_method }}>
Raw sequence.
Enter a sequence (FASTA, FASTQ, or plain text).
</label>
</div>
<div class="radio">
<label>
<input type="radio" name="reference_method" value="file_method" class="input-select" data-context="select-form1" data-for="reference_file_method" {{ 'checked' if reference_method == 'file_method' }}>
FASTA/FASTQ/text file.
Upload a file (FASTA, FASTQ, or plain text).
</label>
</div>
<div class="radio">
<label>
<input type="radio" name="reference_method" value="refseq_method" class="input-select" data-context="select-form1" data-for="reference_refseq_method" {{ 'checked' if reference_method == 'refseq_method' }}>
RefSeq accession number.
Enter a RefSeq accession number.
</label>
</div>
</div>
......@@ -92,19 +99,19 @@ Please supply a reference sequence and an observed sequence.
<div class="radio">
<label>
<input type="radio" name="sample_method" value="raw_method" class="input-select" data-context="select-form2" data-for="sample_raw_method" {{ 'checked' if sample_method == 'raw_method' or not sample_method }}>
Raw sequence.
Enter a sequence (FASTA, FASTQ, or plain text).
</label>
</div>
<div class="radio">
<label>
<input type="radio" name="sample_method" value="file_method" class="input-select" data-context="select-form2" data-for="sample_file_method" {{ 'checked' if sample_method == 'file_method' }}>
FASTA/FASTQ/text file.
Upload a file (FASTA, FASTQ, or plain text).
</label>
</div>
<div class="radio">
<label>
<input type="radio" name="sample_method" value="refseq_method" class="input-select" data-context="select-form2" data-for="sample_refseq_method" {{ 'checked' if sample_method == 'refseq_method' }}>
RefSeq accession number.
Enter a RefSeq accession number.
</label>
</div>
</div>
......
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