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Commit 2fc16d8c authored by Vermaat's avatar Vermaat
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Use latest GRCh37.p13 in mapview import documentation

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......@@ -62,11 +62,11 @@ genome assemblies as used by their `Map Viewer
For example, to import transcript mappings for the GRCh37 assembly, run the
following::
$ wget ftp://ftp.ncbi.nih.gov/genomes/H_sapiens/ARCHIVE/BUILD.37.2/mapview/seq_gene.md.gz
$ wget ftp://ftp.ncbi.nlm.nih.gov/genomes/MapView/Homo_sapiens/sequence/ANNOTATION_RELEASE.105/initial_release/seq_gene.md.gz
$ zcat seq_gene.md.gz | sort -t $'\t' -k 11,11 -k 2,2 > seq_gene.sorted.md
$ mutalyzer-admin assemblies import-mapview seq_gene.sorted.md 'GRCh37.p2-Primary Assembly'
$ mutalyzer-admin assemblies import-mapview seq_gene.sorted.md 'GRCh37.p13-Primary Assembly'
.. note:: The last argument, ``GRCh37.p2-Primary Assembly``, defines the group
.. note:: The last argument, ``GRCh37.p13-Primary Assembly``, defines the group
label to filter the file on. You would usually want to include it.
......
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