From 2fc16d8ccbe8caae3df57dd553ffd39cf2304469 Mon Sep 17 00:00:00 2001
From: Martijn Vermaat <martijn@vermaat.name>
Date: Tue, 13 May 2014 17:44:30 +0200
Subject: [PATCH] Use latest GRCh37.p13 in mapview import documentation
---
doc/admin.rst | 6 +++---
1 file changed, 3 insertions(+), 3 deletions(-)
diff --git a/doc/admin.rst b/doc/admin.rst
index fca9cc8d..e8eecbbc 100644
--- a/doc/admin.rst
+++ b/doc/admin.rst
@@ -62,11 +62,11 @@ genome assemblies as used by their `Map Viewer
For example, to import transcript mappings for the GRCh37 assembly, run the
following::
- $ wget ftp://ftp.ncbi.nih.gov/genomes/H_sapiens/ARCHIVE/BUILD.37.2/mapview/seq_gene.md.gz
+ $ wget ftp://ftp.ncbi.nlm.nih.gov/genomes/MapView/Homo_sapiens/sequence/ANNOTATION_RELEASE.105/initial_release/seq_gene.md.gz
$ zcat seq_gene.md.gz | sort -t $'\t' -k 11,11 -k 2,2 > seq_gene.sorted.md
- $ mutalyzer-admin assemblies import-mapview seq_gene.sorted.md 'GRCh37.p2-Primary Assembly'
+ $ mutalyzer-admin assemblies import-mapview seq_gene.sorted.md 'GRCh37.p13-Primary Assembly'
-.. note:: The last argument, ``GRCh37.p2-Primary Assembly``, defines the group
+.. note:: The last argument, ``GRCh37.p13-Primary Assembly``, defines the group
label to filter the file on. You would usually want to include it.
--
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