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  • Vermaat's avatar
    Use interval binning scheme on transcript mappings · e0a127cf
    Vermaat authored
    This speeds up lookup of transcript mappings by genomic position
    a lot. By filtering on bin index, such a query now uses the index
    on the bin column, where previously this would involve a
    sequential table scan.
    
    http://interval-binning.readthedocs.org/
    e0a127cf