Skip to content
Snippets Groups Projects
Select Git revision
  • biopet-bios
  • develop
  • epic-BIOPET-669
  • example-tarextract
  • fix-BIOPET-245
  • fix-BIOPET-593
  • fix-BIOPET-724
  • fix-BIOPET-728
  • fix-BIOPET-730
  • fix-BIOPET-782
  • gonl-GRCh38
  • master default
  • v0.9.0
  • v0.8.0
  • BIOS
  • v0.7.0
  • v0.6.0
  • v0.5.0
  • v0.4.0
  • v0.4.0-RC2
  • v0.4.0-RC1
  • v0.3.2
  • v0.3.1
  • v0.3.0
  • v0.2.0
  • start-feature-branching
  • v0.1.4
  • v0.1.2
  • v0.1.1
  • v0.1.0
  • 0.1.0
31 results
You can move around the graph by using the arrow keys.
Created with Raphaël 2.2.028Sep2725242322211817161413111098765432131Aug3029282726252423222120191817161514131211643130Jul28272423222117167632130Jun2928272625Aggregate threads and corememory for pipesCatch NullPointer from queue and convert is to null instead of an failureMoved codeHide null pointen from unit testsFixed single-end runsOverrider default shell from queueAdded depsFix fastqc dependencyFixed QcCommandadded scripts to copy sourcesMerge remote-tracking branch 'origin/feature-gears' into feature-gearsFix sambamba, all config must derive from 1 key only: "sambamba" (for all sub commands)replaced --output option definition + replaced with ,Added aggregate option for scoverageremoved qscript keyAdded gears as optional step into mappingRefactoring of gearsMerge remote-tracking branch 'origin/develop' into feature-scoverageRemove some test from shiva-gatksamples testingfix sample showfix importbedfix samplesImportmove old classes for later useAdded Aggregate moduleMove breaking classestiny fixdata sources testfixadd cmd function to nicely format cmdLine in human readable formatFix importreformat some sentencesadded some extra information. Changed some typosadd root value to all children of ManweAdded FilePipesChanged menuannotate-bed and annotate-vcfManwe Datasources extensionsmove output argument to main Manwe class.manwe samples