Skip to content
Snippets Groups Projects
Commit fb7b5d5d authored by Peter van 't Hof's avatar Peter van 't Hof
Browse files

Added bamstats to executable

parent 74091f0f
No related branches found
No related tags found
No related merge requests found
Hide whitespace changes
Inline Side-by-side
biopet-tools-package/src/main/scala/nl/lumc/sasc/biopet/BiopetToolsExecutable.scala
+ 2
− 2
View file @ fb7b5d5d
......@@ -14,7 +14,6 @@
*/
package nl.lumc.sasc.biopet
import nl.lumc.sasc.biopet.tools.flagstat.BiopetFlagstat
import nl.lumc.sasc.biopet.utils.{ BiopetExecutable, MainCommand }
object BiopetToolsExecutable extends BiopetExecutable {
......@@ -23,10 +22,11 @@ object BiopetToolsExecutable extends BiopetExecutable {
def tools: List[MainCommand] = List(
nl.lumc.sasc.biopet.tools.AnnotateVcfWithBed,
nl.lumc.sasc.biopet.tools.bamstats.BamStats,
nl.lumc.sasc.biopet.tools.BaseCounter,
nl.lumc.sasc.biopet.tools.BastyGenerateFasta,
nl.lumc.sasc.biopet.tools.BedtoolsCoverageToCounts,
BiopetFlagstat,
nl.lumc.sasc.biopet.tools.flagstat.BiopetFlagstat,
nl.lumc.sasc.biopet.tools.CheckAllelesVcfInBam,
nl.lumc.sasc.biopet.tools.ExtractAlignedFastq,
nl.lumc.sasc.biopet.tools.FastqSplitter,
......
0% or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment