Commit eb23b56e authored by Peter van 't Hof's avatar Peter van 't Hof
Browse files

- fixed namespaceing in AddOrReplaceReadGroups

parent 6ebb058a
......@@ -119,12 +119,12 @@ class Mapping(private var globalConfig: Config) extends QScript {
this.nCoresRequest = 2
this.jobResourceRequests :+= "h_vmem=4G"
this.RGLB = RGLB
this.RGPL = RGPL
this.RGPU = RGPU
this.RGSM = RGSM
if (RGCN != null) this.RGCN = RGCN
if (RGDS != null) this.RGDS = RGDS
this.RGLB = qscript.RGLB
this.RGPL = qscript.RGPL
this.RGPU = qscript.RGPU
this.RGSM = qscript.RGSM
if (RGCN != null) this.RGCN = qscript.RGCN
if (RGDS != null) this.RGDS = qscript.RGDS
}
add(addOrReplaceReadGroups)
......
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