Commit e6d50ed6 authored by Peter van 't Hof's avatar Peter van 't Hof

Fixed style

parent 1fb995aa
...@@ -8,11 +8,10 @@ import org.scalatest.testng.TestNGSuite ...@@ -8,11 +8,10 @@ import org.scalatest.testng.TestNGSuite
import org.testng.annotations.Test import org.testng.annotations.Test
/** /**
* Created by ahbbollen on 3-3-16. * Created by ahbbollen on 3-3-16.
*/ */
class VariantEffectPredictorTest extends TestNGSuite with Matchers { class VariantEffectPredictorTest extends TestNGSuite with Matchers {
@Test @Test
def testSummaryStats = { def testSummaryStats = {
val file = new File(Paths.get(getClass.getResource("/vep.metrics").toURI).toString) val file = new File(Paths.get(getClass.getResource("/vep.metrics").toURI).toString)
...@@ -31,7 +30,6 @@ class VariantEffectPredictorTest extends TestNGSuite with Matchers { ...@@ -31,7 +30,6 @@ class VariantEffectPredictorTest extends TestNGSuite with Matchers {
stats.contains("Distribution_of_variants_on_chromosome_1") shouldBe true stats.contains("Distribution_of_variants_on_chromosome_1") shouldBe true
stats.contains("Position_in_protein") shouldBe true stats.contains("Position_in_protein") shouldBe true
} }
} }
...@@ -15,7 +15,7 @@ ...@@ -15,7 +15,7 @@
*/ */
package nl.lumc.sasc.biopet.pipelines.gentrap package nl.lumc.sasc.biopet.pipelines.gentrap
import java.io.{File, FileOutputStream} import java.io.{ File, FileOutputStream }
import com.google.common.io.Files import com.google.common.io.Files
import nl.lumc.sasc.biopet.extensions._ import nl.lumc.sasc.biopet.extensions._
...@@ -25,7 +25,7 @@ import nl.lumc.sasc.biopet.utils.config.Config ...@@ -25,7 +25,7 @@ import nl.lumc.sasc.biopet.utils.config.Config
import org.broadinstitute.gatk.queue.QSettings import org.broadinstitute.gatk.queue.QSettings
import org.scalatest.Matchers import org.scalatest.Matchers
import org.scalatest.testng.TestNGSuite import org.scalatest.testng.TestNGSuite
import org.testng.annotations.{DataProvider, Test} import org.testng.annotations.{ DataProvider, Test }
abstract class GentrapTestAbstract(val expressionMeasure: String) extends TestNGSuite with Matchers { abstract class GentrapTestAbstract(val expressionMeasure: String) extends TestNGSuite with Matchers {
......
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