From e6d50ed6181097cffc6a989e4f60a22480d7975f Mon Sep 17 00:00:00 2001 From: Peter van 't Hof Date: Sun, 13 Mar 2016 10:09:04 +0100 Subject: [PATCH] Fixed style --- .../sasc/biopet/extensions/VariantEffectPredictorTest.scala | 6 ++---- .../nl/lumc/sasc/biopet/pipelines/gentrap/GentrapTest.scala | 4 ++-- 2 files changed, 4 insertions(+), 6 deletions(-) diff --git a/public/biopet-extensions/src/test/scala/nl/lumc/sasc/biopet/extensions/VariantEffectPredictorTest.scala b/public/biopet-extensions/src/test/scala/nl/lumc/sasc/biopet/extensions/VariantEffectPredictorTest.scala index 54e5ef673..3fc8da507 100644 --- a/public/biopet-extensions/src/test/scala/nl/lumc/sasc/biopet/extensions/VariantEffectPredictorTest.scala +++ b/public/biopet-extensions/src/test/scala/nl/lumc/sasc/biopet/extensions/VariantEffectPredictorTest.scala @@ -8,11 +8,10 @@ import org.scalatest.testng.TestNGSuite import org.testng.annotations.Test /** - * Created by ahbbollen on 3-3-16. - */ + * Created by ahbbollen on 3-3-16. + */ class VariantEffectPredictorTest extends TestNGSuite with Matchers { - @Test def testSummaryStats = { val file = new File(Paths.get(getClass.getResource("/vep.metrics").toURI).toString) @@ -31,7 +30,6 @@ class VariantEffectPredictorTest extends TestNGSuite with Matchers { stats.contains("Distribution_of_variants_on_chromosome_1") shouldBe true stats.contains("Position_in_protein") shouldBe true - } } diff --git a/public/gentrap/src/test/scala/nl/lumc/sasc/biopet/pipelines/gentrap/GentrapTest.scala b/public/gentrap/src/test/scala/nl/lumc/sasc/biopet/pipelines/gentrap/GentrapTest.scala index 7f49fcb1c..81e97ab6a 100644 --- a/public/gentrap/src/test/scala/nl/lumc/sasc/biopet/pipelines/gentrap/GentrapTest.scala +++ b/public/gentrap/src/test/scala/nl/lumc/sasc/biopet/pipelines/gentrap/GentrapTest.scala @@ -15,7 +15,7 @@ */ package nl.lumc.sasc.biopet.pipelines.gentrap -import java.io.{File, FileOutputStream} +import java.io.{ File, FileOutputStream } import com.google.common.io.Files import nl.lumc.sasc.biopet.extensions._ @@ -25,7 +25,7 @@ import nl.lumc.sasc.biopet.utils.config.Config import org.broadinstitute.gatk.queue.QSettings import org.scalatest.Matchers import org.scalatest.testng.TestNGSuite -import org.testng.annotations.{DataProvider, Test} +import org.testng.annotations.{ DataProvider, Test } abstract class GentrapTestAbstract(val expressionMeasure: String) extends TestNGSuite with Matchers { -- GitLab