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Commit d3baecc9 authored by Sander Bollen's avatar Sander Bollen
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make better use of scala implicit returns

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public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/tools/VEPNormalizer.scala
+ 2
− 3
View file @ d3baecc9
...@@ -228,9 +228,8 @@ object VEPNormalizer extends ToolCommand { ...@@ -228,9 +228,8 @@ object VEPNormalizer extends ToolCommand {
* @return list of strings with new info fields * @return list of strings with new info fields
*/ */
def parseCsq(header: VCFHeader): Array[String] = { def parseCsq(header: VCFHeader): Array[String] = {
val csq = header.getInfoHeaderLine("CSQ").getDescription header.getInfoHeaderLine("CSQ").getDescription.
val items = csq.split(':')(1).trim.split('|') split(':')(1).trim.split('|')
items
} }
/** /**
......
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