diff --git a/public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/tools/VEPNormalizer.scala b/public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/tools/VEPNormalizer.scala index 1dc5a65fd0b6789edf756d333fa0712273cabf4c..dabc145564de837a62e869e9c40a3ed710187349 100644 --- a/public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/tools/VEPNormalizer.scala +++ b/public/biopet-framework/src/main/scala/nl/lumc/sasc/biopet/tools/VEPNormalizer.scala @@ -228,9 +228,8 @@ object VEPNormalizer extends ToolCommand { * @return list of strings with new info fields */ def parseCsq(header: VCFHeader): Array[String] = { - val csq = header.getInfoHeaderLine("CSQ").getDescription - val items = csq.split(':')(1).trim.split('|') - items + header.getInfoHeaderLine("CSQ").getDescription. + split(':')(1).trim.split('|') } /**