Commit d057ab01 authored by Peter van 't Hof's avatar Peter van 't Hof
Browse files

Fix bug on gubbins

parent fbdd632c
......@@ -106,8 +106,8 @@ class Basty(val root: Configurable) extends QScript with MultiSampleQScript {
add(gubbins)
}
addTreeJobs(catVariantsSnps.output, catConsensusVariants.output, outputDir + "trees" + File.separator + "snps_only", "snps_only")
addTreeJobs(catVariants.output, catConsensusVariantsSnps.output, outputDir + "trees" + File.separator + "snps_indels", "snps_indels")
addTreeJobs(catVariantsSnps.output, catConsensusVariantsSnps.output, outputDir + "trees" + File.separator + "snps_only", "snps_only")
addTreeJobs(catVariants.output, catConsensusVariants.output, outputDir + "trees" + File.separator + "snps_indels", "snps_indels")
}
// Called for each sample
......
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