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biopet.biopet
Commits
c36fb267
Commit
c36fb267
authored
Aug 18, 2014
by
Peter van 't Hof
Browse files
Spelling fix
parent
3dbf492f
Changes
1
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Inline
Side-by-side
biopet-framework/src/main/scala/nl/lumc/sasc/biopet/core/MultiSampleQScript.scala
View file @
c36fb267
...
...
@@ -29,8 +29,8 @@ trait MultiSampleQScript extends BiopetQScript {
final
def
runLibraryJobs
(
sampleConfig
:
Map
[
String
,
Any
])
:
Map
[
String
,
Map
[
String
,
File
]]
=
{
var
output
:
Map
[
String
,
Map
[
String
,
File
]]
=
Map
()
val
sampleID
=
sampleConfig
(
"ID"
)
if
(
sampleConfig
.
contains
(
"librar
y
s"
))
{
val
runs
=
Configurable
.
any2map
(
sampleConfig
(
"librar
y
s"
))
if
(
sampleConfig
.
contains
(
"librar
ie
s"
))
{
val
runs
=
Configurable
.
any2map
(
sampleConfig
(
"librar
ie
s"
))
for
((
key
,
value
)
<-
runs
)
{
var
library
=
Configurable
.
any2map
(
value
)
if
(!
library
.
contains
(
"ID"
))
library
+=
(
"ID"
->
key
)
...
...
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