Skip to content
Snippets Groups Projects
Commit c2fdfed6 authored by Peter van 't Hof's avatar Peter van 't Hof
Browse files

Force no flexiprep in gears

parent fcecdf0c
No related branches found
No related tags found
No related merge requests found
......@@ -67,6 +67,8 @@ trait MultisampleMappingTrait extends MultiSampleQScript
override def defaults = super.defaults ++ Map("reordersam" -> Map("allow_incomplete_dict_concordance" -> true))
override def fixedValues = Map("gearssingle" -> Map("skip_flexiprep" -> true))
/** In a default multisample mapping run there are no multsample jobs. This method can be overriden by other pipelines */
def addMultiSampleJobs(): Unit = {
// this code will be executed after all code of all samples is executed
......
0% Loading or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment