fix bug

aab08ec8 · Peter van 't Hof · 96c33eab · aab08ec8
Commit aab08ec8 authored Mar 04, 2015 by Peter van 't Hof
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public/shiva/src/main/scala/nl/lumc/sasc/biopet/pipelines/shiva/ShivaTrait.scala ...cala/nl/lumc/sasc/biopet/pipelines/shiva/ShivaTrait.scala +1 -1

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--- a/public/shiva/src/main/scala/nl/lumc/sasc/biopet/pipelines/shiva/ShivaTrait.scala
+++ b/public/shiva/src/main/scala/nl/lumc/sasc/biopet/pipelines/shiva/ShivaTrait.scala
@@ -198,7 +198,7 @@ trait ShivaTrait extends MultiSampleQScript with SummaryQScript {
      }
    }).flatten.toList)

-    lazy val variantcalling = if (config("single_sample_variantcalling", default = true).asBoolean) {
+    lazy val variantcalling = if (config("single_sample_variantcalling", default = false).asBoolean) {
      Some(makeVariantcalling(multisample = true))
    } else None