Commit c0064f43 authored by bow's avatar bow
Browse files

Update Cufflinks defaults for cluster run

parent 3ed93bee
......@@ -29,6 +29,12 @@ class Cufflinks(val root: Configurable) extends BiopetCommandLineFunction {
/** default executable */
executable = config("exe", default = "cufflinks")
/** default threads */
override def defaultThreads = num_threads.getOrElse(1)
/** default vmem for cluster jobs */
override def defaultVmem = "4G"
/** input file */
@Input(doc = "Input file (SAM or BAM)", required = true)
var input: File = null
......
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