Fixed test

bb66d720 · Peter van 't Hof · d2673ec5 · bb66d720
Commit bb66d720 authored May 11, 2016 by Peter van 't Hof
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Showing with 6 additions and 1 deletion

shiva/src/test/scala/nl/lumc/sasc/biopet/pipelines/shiva/ShivaTest.scala ...scala/nl/lumc/sasc/biopet/pipelines/shiva/ShivaTest.scala +6 -1

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--- a/shiva/src/test/scala/nl/lumc/sasc/biopet/pipelines/shiva/ShivaTest.scala
+++ b/shiva/src/test/scala/nl/lumc/sasc/biopet/pipelines/shiva/ShivaTest.scala
@@ -224,7 +224,12 @@ object ShivaTest {
    "pysvtools" -> Map(
      "exe" -> "test",
      "exclusion_regions" -> "test",
-      "translocations_only" -> false)
+      "translocations_only" -> false),
+    "freec" -> Map(
+      "exe" -> "test",
+      "chrFiles" -> "test",
+      "chrLenFile" -> "test"
+    )
  )

  val sample1 = Map(