Commit bb158f36 authored by Peter van 't Hof's avatar Peter van 't Hof
Browse files

- Fixed output file

parent f95148c6
...@@ -30,7 +30,7 @@ class Star(private var globalConfig: Config) extends CommandLineFunction { ...@@ -30,7 +30,7 @@ class Star(private var globalConfig: Config) extends CommandLineFunction {
if (threads > maxThreads) threads = maxThreads if (threads > maxThreads) threads = maxThreads
nCoresRequest = Option(threads) nCoresRequest = Option(threads)
@Output var outputSam: File = new File(outputDir + "/star_output.sam") @Output var outputSam: File = new File(outputDir + "/Aligned.out.sam")
def commandLine : String= { def commandLine : String= {
//init() //init()
......
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