Skip to content
Snippets Groups Projects
Commit b9f9c369 authored by Peter van 't Hof's avatar Peter van 't Hof
Browse files

Fixed mother and father key

parent 2c7bb613
No related branches found
No related tags found
No related merge requests found
......@@ -94,7 +94,7 @@ trait MultiSampleQScript extends SummaryQScript { qscript: QScript =>
}
lazy val father = {
val g: Option[String] = config("gender", sample = sampleId, library = null)
val g: Option[String] = config("father", sample = sampleId, library = null)
g.foreach { father =>
if (sampleId != father) Logging.addError(s"Father for $sampleId can not be itself")
if (samples.contains(father)) if (samples(father).gender == Gender.Male)
......@@ -105,7 +105,7 @@ trait MultiSampleQScript extends SummaryQScript { qscript: QScript =>
}
lazy val mother = {
val g: Option[String] = config("gender", sample = sampleId, library = null)
val g: Option[String] = config("mother", sample = sampleId, library = null)
g.foreach { mother =>
if (sampleId != mother) Logging.addError(s"mother for $sampleId can not be itself")
if (samples.contains(mother)) if (samples(mother).gender == Gender.Female)
......
0% Loading or .
You are about to add 0 people to the discussion. Proceed with caution.
Finish editing this message first!
Please register or to comment