From b6e78a5cbfcfbcca4b7274e610a48aa0879eb8b5 Mon Sep 17 00:00:00 2001
From: Wai Yi Leung <w.y.leung@lumc.nl>
Date: Fri, 11 Mar 2016 10:46:49 +0100
Subject: [PATCH] Fix typo
---
.../src/main/scala/nl/lumc/sasc/biopet/tools/SeqStat.scala | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/public/biopet-tools/src/main/scala/nl/lumc/sasc/biopet/tools/SeqStat.scala b/public/biopet-tools/src/main/scala/nl/lumc/sasc/biopet/tools/SeqStat.scala
index 85ef7ecff..ac4afb7f9 100644
--- a/public/biopet-tools/src/main/scala/nl/lumc/sasc/biopet/tools/SeqStat.scala
+++ b/public/biopet-tools/src/main/scala/nl/lumc/sasc/biopet/tools/SeqStat.scala
@@ -122,7 +122,7 @@ object SeqStat extends ToolCommand {
*
* @param record FastqRecord
*/
- def procesRead(record: FastqRecord): Unit = {
+ def processRead(record: FastqRecord): Unit = {
// Adjust/expand the length of baseStat case classes to the size of current
// read if the current list is not long enough to store the data
@@ -166,7 +166,7 @@ object SeqStat extends ToolCommand {
def seqStat(fqreader: FastqReader): Long = {
var numReads: Long = 0
for (read <- fqreader.iterator.asScala) {
- procesRead(read)
+ processRead(read)
numReads += 1
}
--
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