Updated and added some release notes relevant to mention for v0.7.0

docs/releasenotes/release_notes_0.7.0.md

@@ -9,15 +9,29 @@
 
 ## Functionality
 
-* [Gears](../pipelines/gears.md): Added open reference module of Qiime(http://qiime.org/)
+* [Gears](../pipelines/gears.md): Added `pick_open_reference_otus` reference module of [Qiime](http://qiime.org/)
 * Fixed default aligner in [Gentrap](../pipelines/gentrap.md) to gsnap
-* Makes sample and library id required in [Flexiprep](../pipelines/flexiprep.md)
-* Raise some default memory limits
-* Fixed a non-required value in Shiva
-* Added an auto detect for MACS2 if sample is single-end or paired-end
-* Added a sort by name step when htseq in Gentrap is executed
+* Make `sample` and `library id` required in [Flexiprep](../pipelines/flexiprep.md) when started from the `CLI`
+* Raise some default memory limits ([#356](https://git.lumc.nl/biopet/biopet/issues/356))
+* [Carp](../pipelines/carp.md): Our MACS2 wrapper now auto-detects whether a sample is single-end or paired-end
+* Added a `sort by name` step when htseq in Gentrap is executed
 * Fixed file name of bam files in Carp
-* Report now corrects for secondary reads in alignment stats
 * VcfWithVcf now checks if chromosomes are in the correct reference
 * Added sync stats to flexiprep report
-* Added check in BamMetrics to check a given bed file is acording to the reference that is used on init of pipeline
\ No newline at end of file
+* Added check in BamMetrics to check a given bed file is according to the reference that is used on init of pipeline
+* [TinyCap](../pipelines/tinycap.md) has now validated settings for miRNA runs. Some parameters changed for alignment.
+* [Flexiprep](../pipelines/flexiprep.md) has the option to provide custom adapters sequences and ignoring adapters found by `FastQC`. 
+* Utils - BamUtils is now estimating insertsize by sampling the bam-file randomly.
+* Fix in VCF filter (#370)[https://git.lumc.nl/biopet/biopet/merge_requests/370]
+* Fix Star wrapper - added full functionality in wrapper.
+
+## Reporting
+
+* Report now corrects for secondary reads in alignment stats
+* ShivaSVcalling, fixing the headers in the output files for Clever, Breakdancer and Pindel.
+* [Flexiprep](../pipelines/flexiprep.md) now reports the histogram of sizes from clipped adapters. (raw json output)
+* Fix reported mapping percentage in case of allowing multimapping (in RNAseq aligners)
+
+## Backward incompatible changes
+
+* Changing `namespace` in config values. [!348](https://git.lumc.nl/biopet/biopet/merge_requests/348)