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biopet.biopet
Commits
9ba68d82
Commit
9ba68d82
authored
Nov 12, 2014
by
Peter van 't Hof
Browse files
Change util to utils
parent
c50d17a2
Changes
2
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biopet-framework/src/main/scala/nl/lumc/sasc/biopet/tools/BastyGenerateFasta.scala
View file @
9ba68d82
...
...
@@ -11,7 +11,7 @@ import nl.lumc.sasc.biopet.core.ToolCommand
import
nl.lumc.sasc.biopet.core.config.Configurable
import
org.broadinstitute.gatk.utils.commandline.
{
Input
,
Output
}
import
scala.collection.JavaConversions._
import
nl.lumc.sasc.biopet.util.VcfUtils._
import
nl.lumc.sasc.biopet.util
s
.VcfUtils._
class
BastyGenerateFasta
(
val
root
:
Configurable
)
extends
BiopetJavaCommandLineFunction
{
javaMainClass
=
getClass
.
getName
...
...
biopet-framework/src/main/scala/nl/lumc/sasc/biopet/util/VcfUtils.scala
→
biopet-framework/src/main/scala/nl/lumc/sasc/biopet/util
s
/VcfUtils.scala
View file @
9ba68d82
package
nl.lumc.sasc.biopet.util
package
nl.lumc.sasc.biopet.util
s
import
htsjdk.variant.variantcontext.VariantContext
import
scala.collection.JavaConversions._
...
...
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