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biopet.biopet
Commits
95ae061e
Commit
95ae061e
authored
Oct 06, 2015
by
Peter van 't Hof
Browse files
Fixed tests in flexiprep
parent
e404aa7b
Changes
1
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public/flexiprep/src/test/scala/nl/lumc/sasc/biopet/pipelines/flexiprep/FlexiprepTest.scala
View file @
95ae061e
...
...
@@ -73,11 +73,7 @@ class FlexiprepTest extends TestNGSuite with Matchers {
flexiprep
.
libId
=
Some
(
"1"
)
flexiprep
.
script
()
flexiprep
.
functions
.
count
(
_
.
isInstanceOf
[
Fastqc
])
shouldBe
(
if
(
paired
&&
(
skipClip
&&
skipTrim
))
2
else
if
(!
paired
&&
(
skipClip
&&
skipTrim
))
1
else
if
(
paired
&&
!(
skipClip
&&
skipTrim
))
4
else
if
(!
paired
&&
!(
skipClip
&&
skipTrim
))
2
)
flexiprep
.
functions
.
count
(
_
.
isInstanceOf
[
Fastqc
])
shouldBe
(
if
(
paired
)
4
else
2
)
flexiprep
.
functions
.
count
(
_
.
isInstanceOf
[
SeqStat
])
shouldBe
(
if
(
paired
)
4
else
2
)
}
...
...
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