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biopet.biopet
Commits
95536e65
Commit
95536e65
authored
May 11, 2016
by
Peter van 't Hof
Browse files
Added summary test
parent
9e6d1d88
Changes
1
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Inline
Side-by-side
kopisu/src/test/scala/nl/lumc/sasc/biopet/pipelines/kopisu/KopisuTest.scala
View file @
95536e65
...
...
@@ -73,6 +73,7 @@ class KopisuTest extends TestNGSuite with Matchers {
pipeline
.
script
()
pipeline
.
freecMethod
.
isDefined
shouldBe
freec
pipeline
.
summarySettings
.
get
(
"freec_method"
)
shouldBe
Some
(
freec
)
pipeline
.
functions
.
count
(
_
.
isInstanceOf
[
FreeC
])
shouldBe
(
if
(
freec
)
bams
else
0
)
pipeline
.
functions
.
count
(
_
.
isInstanceOf
[
FreeCAssessSignificancePlot
])
shouldBe
(
if
(
freec
)
bams
else
0
)
...
...
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