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Commit 847b1265 authored by Wai Yi Leung's avatar Wai Yi Leung
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Remove empty constructs

parent c2b3c276
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...@@ -38,7 +38,7 @@ class Cutadapt(root: Configurable, fastqc: Fastqc) extends nl.lumc.sasc.biopet.e ...@@ -38,7 +38,7 @@ class Cutadapt(root: Configurable, fastqc: Fastqc) extends nl.lumc.sasc.biopet.e
(fastqc.foundAdapters ++ customAdapters) (fastqc.foundAdapters ++ customAdapters)
.map(adapter => adapter.seq -> adapter.name).toMap .map(adapter => adapter.seq -> adapter.name).toMap
} else { } else {
Map.empty ++ customAdapters.map(adapter => adapter.seq -> adapter.name).toMap customAdapters.map(adapter => adapter.seq -> adapter.name).toMap
} }
} }
......
...@@ -107,7 +107,7 @@ class QcCommand(val root: Configurable, val fastqc: Fastqc) extends BiopetComman ...@@ -107,7 +107,7 @@ class QcCommand(val root: Configurable, val fastqc: Fastqc) extends BiopetComman
val foundAdapters = if (!cutadapt.ignoreFastqcAdapters) { val foundAdapters = if (!cutadapt.ignoreFastqcAdapters) {
fastqc.foundAdapters.map(_.seq) ++ cutadapt.customAdapters.map(_.seq) fastqc.foundAdapters.map(_.seq) ++ cutadapt.customAdapters.map(_.seq)
} else { } else {
Seq.empty ++ cutadapt.customAdapters.map(_.seq) cutadapt.customAdapters.map(_.seq)
} }
if (foundAdapters.nonEmpty) { if (foundAdapters.nonEmpty) {
......
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