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biopet.biopet
Commits
7f1d3bac
Commit
7f1d3bac
authored
Jun 25, 2015
by
Peter van 't Hof
Browse files
Moved sample metrics to other directory
parent
3a1bd525
Changes
1
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public/shiva/src/main/scala/nl/lumc/sasc/biopet/pipelines/shiva/ShivaTrait.scala
View file @
7f1d3bac
...
...
@@ -254,7 +254,7 @@ trait ShivaTrait extends MultiSampleQScript with SummaryQScript with Reference {
val
bamMetrics
=
new
BamMetrics
(
qscript
)
bamMetrics
.
sampleId
=
Some
(
sampleId
)
bamMetrics
.
inputBam
=
preProcessBam
.
get
bamMetrics
.
outputDir
=
sampleDir
bamMetrics
.
outputDir
=
new
File
(
sampleDir
,
"metrics"
)
bamMetrics
.
init
bamMetrics
.
biopetScript
addAll
(
bamMetrics
.
functions
)
...
...
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