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biopet.biopet
Commits
793a34eb
Commit
793a34eb
authored
Jan 15, 2016
by
bow
Browse files
Rename camel caps to underscore
parent
a3009b39
Changes
1
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Inline
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public/mapping/src/main/scala/nl/lumc/sasc/biopet/pipelines/mapping/MultisampleMappingReport.scala
View file @
793a34eb
...
...
@@ -66,7 +66,7 @@ trait MultisampleMappingReportTrait extends MultisampleReportBuilder {
"After QC fastq files"
->
ReportSection
(
"/nl/lumc/sasc/biopet/pipelines/flexiprep/flexiprepOutputfiles.ssp"
),
"Bam files per lib"
->
ReportSection
(
"/nl/lumc/sasc/biopet/pipelines/mapping/outputBamfiles.ssp"
,
Map
(
"sampleLevel"
->
false
)),
"Preprocessed bam files"
->
ReportSection
(
"/nl/lumc/sasc/biopet/pipelines/mapping/outputBamfiles.ssp"
,
Map
(
"pipelineName"
->
pipelineName
,
"fileTag"
->
"pre
P
rocess
Bam
"
))),
Map
())
Map
(
"pipelineName"
->
pipelineName
,
"fileTag"
->
"
output_bam_
pre
p
rocess"
))),
Map
())
/** Single sample page */
def
samplePage
(
sampleId
:
String
,
args
:
Map
[
String
,
Any
])
:
ReportPage
=
{
...
...
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