Commit 72de7b9d authored by Peter van 't Hof's avatar Peter van 't Hof
Browse files

Remove fixme

parent 03df7987
......@@ -172,7 +172,6 @@ class BamMetrics(val root: Configurable) extends QScript with SummaryQScript wit
val coverageFile = new File(targetDir, inputBam.getName.stripSuffix(".bam") + ".coverage")
//FIXME:should use piping
val bedCov = BedtoolsCoverage(this, inputBam, intervals.bed, coverageFile, depth = true)
val covStats = CoverageStats(this, coverageFile, targetDir)
covStats.title = Some("Coverage for " + targetName)
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