Commit 68d7fab7 authored by bow's avatar bow
Browse files

Merge branch 'patch-bam2wig' into 'develop'

Patch bam2wig

See merge request !128
parents 99cc75c4 d9e2a1e2
......@@ -38,7 +38,7 @@ class Bam2Wig(val root: Configurable) extends QScript with BiopetQScript {
val wigToBigWig = new WigToBigWig(this)
wigToBigWig.inputWigFile = igvCount.wig.get
wigToBigWig.inputChromSizesFile = bs.chromSizesFile
wigToBigWig.outputBigWig = swapExt(outputDir, bamFile, ".bam", ".bigwig")
wigToBigWig.outputBigWig = swapExt(outputDir, bamFile, ".bam", ".bw")
add(wigToBigWig)
}
}
......
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