Commit 31bf53d3 authored by Sander Bollen's avatar Sander Bollen
Browse files

SageFastqCountTest. Not much to do here.

parent 3c33ec7e
import java.nio.file.Paths
import org.scalatest.Matchers
import org.scalatest.mock.MockitoSugar
import org.scalatest.testng.TestNGSuite
import org.testng.annotations.Test
* Created by ahbbollen on 28-8-15.
class SageCountFastqTest extends TestNGSuite with MockitoSugar with Matchers {
import SageCountFastq._
private def resourcePath(p: String): String = {
val fq = resourcePath("/paired01a.fq")
def testMain() = {
val temp = File.createTempFile("out", ".fastq")
val args = Array("-I", fq, "-o", temp.getAbsolutePath)
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