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biopet.biopet
Commits
182c68fa
Commit
182c68fa
authored
Dec 18, 2015
by
Peter van 't Hof
Browse files
Fixed args
parent
96c56bc1
Changes
1
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public/biopet-extensions/src/main/scala/nl/lumc/sasc/biopet/extensions/Bowtie2.scala
View file @
182c68fa
...
...
@@ -180,8 +180,8 @@ class Bowtie2(val root: Configurable) extends BiopetCommandLineFunction with Ref
optional
(
"-D"
,
D
)
+
optional
(
"-R"
,
R
)
+
/* Paired End */
optional
(
"-minins"
,
minins
)
+
optional
(
"-maxins"
,
maxins
)
+
optional
(
"-
-
minins"
,
minins
)
+
optional
(
"-
-
maxins"
,
maxins
)
+
conditional
(
fr
,
"--fr"
)
+
conditional
(
rf
,
"--rf"
)
+
conditional
(
ff
,
"--ff"
)
+
...
...
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