Raise memory

public/biopet-extensions/src/main/scala/nl/lumc/sasc/biopet/extensions/qiime/MergeOtuMaps.scala

@@ -38,6 +38,8 @@ class MergeOtuMaps(val root: Configurable) extends BiopetCommandLineFunction wit
 
   var failuresFp: Option[File] = None
 
+  override def defaultCoreMemory = 4.0
+
   override def beforeGraph(): Unit = {
     super.beforeGraph()
     require(input.nonEmpty)

public/biopet-extensions/src/main/scala/nl/lumc/sasc/biopet/extensions/qiime/PickClosedReferenceOtus.scala

@@ -33,7 +33,7 @@ class PickClosedReferenceOtus(val root: Configurable) extends BiopetCommandLineF
   var outputDir: File = null
 
   override def defaultThreads = 3
-  override def defaultCoreMemory = 12.0
+  override def defaultCoreMemory = 16.0
   def versionCommand = executable + " --version"
   def versionRegex = """Version: (.*)""".r
 

public/biopet-extensions/src/main/scala/nl/lumc/sasc/biopet/extensions/qiime/SplitLibrariesFastq.scala

@@ -56,6 +56,8 @@ class SplitLibrariesFastq(val root: Configurable) extends BiopetCommandLineFunct
 
   def outputSeqs = new File(outputDir, "seqs.fna")
 
+  override def defaultCoreMemory = 4.0
+
   override def beforeGraph(): Unit = {
     super.beforeGraph()
     require(input.nonEmpty)