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0a897753

Commit 0a897753 authored 9 years ago by Sander van der Zeeuw

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changes in gsnap piping and fix bug in fastqsync

parent a53e20d9

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public/biopet-extensions/src/main/scala/nl/lumc/sasc/biopet/extensions/Gsnap.scala 8 additions, 0 deletions

...src/main/scala/nl/lumc/sasc/biopet/extensions/Gsnap.scala
public/biopet-tools/src/main/scala/nl/lumc/sasc/biopet/tools/FastqSync.scala 2 additions, 2 deletions

.../src/main/scala/nl/lumc/sasc/biopet/tools/FastqSync.scala
public/biopet-tools/src/test/scala/nl/lumc/sasc/biopet/tools/FastqSyncTest.scala 26 additions, 0 deletions

.../test/scala/nl/lumc/sasc/biopet/tools/FastqSyncTest.scala
public/mapping/src/main/scala/nl/lumc/sasc/biopet/pipelines/mapping/Mapping.scala 3 additions, 8 deletions

...scala/nl/lumc/sasc/biopet/pipelines/mapping/Mapping.scala

with 39 additions and 10 deletions

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