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Commit 071c8031 authored by Peter van 't Hof's avatar Peter van 't Hof
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Added imports

parent 10a2a09b
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...@@ -2,6 +2,7 @@ package nl.lumc.sasc.biopet.core.config ...@@ -2,6 +2,7 @@ package nl.lumc.sasc.biopet.core.config
import java.io.File import java.io.File
import org.broadinstitute.gatk.queue.util.Logging import org.broadinstitute.gatk.queue.util.Logging
import scala.language.implicitConversions
trait Configurable extends Logging { trait Configurable extends Logging {
val root: Configurable val root: Configurable
......
...@@ -10,6 +10,7 @@ import org.broadinstitute.gatk.queue.QScript ...@@ -10,6 +10,7 @@ import org.broadinstitute.gatk.queue.QScript
import org.broadinstitute.gatk.queue.extensions.gatk.TaggedFile import org.broadinstitute.gatk.queue.extensions.gatk.TaggedFile
import org.broadinstitute.gatk.utils.commandline.{ Input, Output, Argument } import org.broadinstitute.gatk.utils.commandline.{ Input, Output, Argument }
import scala.collection.SortedMap import scala.collection.SortedMap
import scala.language.reflectiveCalls
class GatkVariantcalling(val root: Configurable) extends QScript with BiopetQScript { class GatkVariantcalling(val root: Configurable) extends QScript with BiopetQScript {
def this() = this(null) def this() = this(null)
......
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