Commits · 2899bf151ba284b2db554baa170158a471fc564e · Martin Larralde / LightMotif · GitLab

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May 19, 2023
- Update instructions to use AVX2 in `README.md` [ci skip] · 2899bf15
  Martin Larralde authored 1 year ago
  
  2899bf15
May 17, 2023
- Update `README.md` with up-to-date benchmark results [ci skip] · cde4077c
  Martin Larralde authored 1 year ago
  
  cde4077c
May 16, 2023
- Reorganize pipeline code into several submodules · 0dee6009
  Martin Larralde authored 1 year ago
  
  0dee6009
May 15, 2023
- Make `Score` trait generic over the striped sequence columns · 53b25d75
  Martin Larralde authored 1 year ago
  
  53b25d75
- Select a default vector type for `Pipeline` based on compile-time features · 684b4091
  Martin Larralde authored 1 year ago
  
  684b4091
- Use `typenum` and `generic-array` crates to handle constant alphabet sizes · 3f0c8c94
  Martin Larralde authored 1 year ago
  
  3f0c8c94
May 11, 2023
- Add links to both versions of the library in `README.md` [ci skip] · c2042d29
  Martin Larralde authored 1 year ago
  
  c2042d29
May 06, 2023
- Fix DNA benchmark and update results `README.md` [ci skip] · fa0657e5
  Martin Larralde authored 1 year ago
  
  fa0657e5
May 04, 2023
- Add links to Rust documentation in the crates `README.md` [ci skip] · 381f816c
  Martin Larralde authored 1 year ago
  
  381f816c
- Improve documentation and metadata across all crates · 83998d54
  Martin Larralde authored 1 year ago
  
  83998d54
May 03, 2023
- Split CI for Rust and Python into two separate Actions workflows · fb34d307
  Martin Larralde authored 1 year ago
  
  fb34d307
- Rewrite `Pipeline` using trait objects for generic implementation · 3c8d6221
  Martin Larralde authored 1 year ago
  
  3c8d6221
- Add a validating constructor for `Background` · 0a324a20
  Martin Larralde authored 1 year ago
  
  0a324a20
May 02, 2023
- Rename `ProbabilityMatrix` to `FrequencyMatrix` and improve public API · 557d01e4
  Martin Larralde authored 1 year ago
  
  557d01e4
May 01, 2023
- Rename `DnaSymbol` to `Nucleotide` and `DnaAlphabet` to `Dna` · fb8eee06
  Martin Larralde authored 1 year ago
  
  fb8eee06
Apr 30, 2023
- Add `FromStr` implementation for `EncodedSequence` · 19516f82
  Martin Larralde authored 1 year ago
  
  19516f82
- Add Codecov badge to `README.md` [ci skip] · 7d59169a
  Martin Larralde authored 1 year ago
  
  7d59169a
- Setup `test.yml` Actions workflow to measure code coverage · a09e0a61
  Martin Larralde authored 1 year ago
  
  a09e0a61
- Add GitHub Actions workflow to compile and test crate · 004b99a4
  Martin Larralde authored 1 year ago
  
  004b99a4
- Add SSSE3 implementation using less optimized masked additions · 9f3f67e4
  Martin Larralde authored 1 year ago
  
  9f3f67e4
- Add `README.md` file with example code · 0aaa8df6
  Martin Larralde authored 1 year ago
  
  0aaa8df6