Explore projects

Example interactive visualizations using Jupyter and Bokeh

A database for genomic variation frequencies

This project is a fork of https://github.com/varda/varda.git

A web interface to the Varda database for genomic variation frequencies

This project is a fork of https://github.com/varda/aule.git

Ansible role for provisioning user accounts

Mirror of https://github.com/biopet/gatk.git

Mirror of https://github.com/biopet/biopet-ansible.git

Ansible playbook for non-root fast bootstrapping (includes eaybuild for tools distribution)

Contains easybuileasyconfig files to permit building the required tools for faster pipelines. The *.eb files are stored in the same hierarchy as in https://github.com/hpcugent/easybuild-easyconfigs and should be pulled and added to the eb robot-path.

Ansible role for Icinga (client)

Data analysis skeleton.

Program that solves sensitivity/specificity tables.

Leiden450K contains a couple of functions for preprocessing of Illumina Human 450K array data, such as reading idat files in parallel, filtering probes and normalization.

Interactive Volcano Plots