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extractor / gesa
MIT LicenseLibrary implementing Generalized Enhanched Suffix Arrays (GESAs)
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extractor / sais-lite-lcp
MIT LicenseForked from https://github.com/kurpicz/sais-lite-lcp.git
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This pipeline takes paired-end fastq files, does a quick genome assembly on them (via Velvet + kmergenie), and predicts antibiotic resistance via abricate.
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Mirrors / SuperElastix
Apache License 2.0Updated -
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Hoogenboom / tssv
MIT LicenseUpdated -
Hoogenboom / fdstools
BSD 3-Clause "New" or "Revised" LicenseData analysis tools for Next Generation Sequencing of forensic DNA markers, including tools for characterisation and filtering of PCR stutter artefacts and other systemic noise, and for automatic detection of the alleles in a sample.
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Run the Grid part of the alternative polyadenylation pipeline
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