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courses / Git course
Creative Commons Attribution 4.0 InternationalWebsite and materials for our Git courses
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R scripts that could be useful for analysis in RP3. For example, extracting information from the metaDb, calculating GC content and length based on the exons files, RNAseq normalization e.g. cqn, ...
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Scripts used for differential gene expression analysis and its reporting (currently for RNA-seq data)
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Mirrors / mutalyzer
Creative Commons Attribution Share Alike 4.0 InternationalMirror of https://github.com/LUMC/mutalyzer.git
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Generate and Annotate DNAse-seq footprint with Transcription factor binding sites.
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Hoogenboom / fdstools
BSD 3-Clause "New" or "Revised" LicenseData analysis tools for Next Generation Sequencing of forensic DNA markers, including tools for characterisation and filtering of PCR stutter artefacts and other systemic noise, and for automatic detection of the alleles in a sample.
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