Updated the operating system basics slides.

basics/basics.tex

@@ -305,110 +305,21 @@
   Powerful command line tools.
 \end{frame}
 
-%\begin{fframe}
-%  \frametitle{Linux}
-%
-%  Several types and many versions are available.
-%  \begin{itemize}
-%    \item Choice between at least $99$ distributions.
-%    \begin{itemize}
-%      \item A distribution is nothing more than an installer and a way of
-%            maintaining software (installation / removal of parts).
-%      \item In essence, the core is the same.
-%    \end{itemize}
-%    \item At the LUMC: Debian / Ubuntu.
-%  \end{itemize}
-%  \bigskip
-%
-%  \vfill
-%  \permfoot{http://www.ee.surrey.ac.uk/Teaching/Unix/}
-%
-%  \permfoot{http://ss64.com/bash/}
-%\end{fframe}
-%
-%\section{Linux}
-%\begin{frame}
-%  \frametitle{Why do people use it?}
-%  \begin{itemize}
-%    \item Easy to use (point and click, just like in other operating systems).
-%    \item Better stability (if something goes wrong, no need to reinstall the
-%      whole operating system).
-%    \item Secure (originally designed for network servers).
-%    \item Practically no Spyware / Addware.
-%    \item Practically no viruses.
-%    \item Short start up time.
-%    \item Less system requirements.
-%    \item Free.
-%  \end{itemize}
-%\end{frame}
-%
-%\begin{frame}
-%  \frametitle{Easy to use}
-%
-%  \begin{figure}[]
-%    \begin{center}
-%      \includegraphics[height=0.8\textheight]{pics/lll-017}
-%    \end{center}
-%    \caption{}
-%    \label{}
-%  \end{figure}
-%\end{frame}
-%
-%\begin{frame}
-%  \frametitle{Why do we use it?}
-%
-%  For large datasets:
-%  \begin{itemize}
-%    \item Better memory management.
-%    \item More flexible to handle larger files.
-%    \item Powerful command line tools (\bt{grep}, \bt{sed}, \bt{awk}, \ldots).
-%    \item Program development in any language you like (Basic,
-%      C$\stackrel{++}{}$, R, Perl, Prolog, \ldots).
-%  \end{itemize}
-%
-%  Since many NGS applications are still in the development phase, we need to
-%  tweak a lot.
-%  \bigskip
-%
-%  In short: it suits our needs for Next Generation Sequencing.
-%\end{frame}
-%
-%\begin{frame}
-%  \frametitle{Other operating systems.}
-%
-%  Popular operating systems in the past.
-%  \begin{itemize}
-%    \item AmigaOS.
-%    \item OS/2.
-%    \item DOS.
-%    \item Mac OS.
-%    \item \ldots
-%  \end{itemize}
-%  \bigskip
-%
-%  Operating systems for research purposes:
-%  \begin{itemize}
-%    \item MINIX.
-%    \item Singularity.
-%  \end{itemize}
-%\end{frame}
-
 \section{Questions?}
 \lastpagetemplate
 \begin{fframe}
   \begin{center}
-    Acknowledgements:
     \bigskip
     \bigskip
-
-    Magnus Palmblad
-
-    Rob Marissen
+    \bigskip
+    \bigskip
 
     Michiel van Galen
+
+    Jeroen Laros
   \end{center}
 
   \vfill
-  \permfoot{https://humgenprojects.lumc.nl/trac/humgenprojects/wiki/scripting}
+  \permfoot{https://humgenprojects.lumc.nl/trac/humgenprojects/wiki/NGS-intro}
 \end{fframe}
 \end{document}