From c8c18333212215110dfe54f9066b05a110bd620a Mon Sep 17 00:00:00 2001
From: "J.F.J. Laros" <j.f.j.laros@lumc.nl>
Date: Fri, 14 Mar 2014 16:22:44 +0100
Subject: [PATCH] Updated the operating system basics slides.
---
basics/basics.tex | 99 +++--------------------------------------------
1 file changed, 5 insertions(+), 94 deletions(-)
diff --git a/basics/basics.tex b/basics/basics.tex
index 3fc42b6..d9d8a54 100644
--- a/basics/basics.tex
+++ b/basics/basics.tex
@@ -305,110 +305,21 @@
Powerful command line tools.
\end{frame}
-%\begin{fframe}
-% \frametitle{Linux}
-%
-% Several types and many versions are available.
-% \begin{itemize}
-% \item Choice between at least $99$ distributions.
-% \begin{itemize}
-% \item A distribution is nothing more than an installer and a way of
-% maintaining software (installation / removal of parts).
-% \item In essence, the core is the same.
-% \end{itemize}
-% \item At the LUMC: Debian / Ubuntu.
-% \end{itemize}
-% \bigskip
-%
-% \vfill
-% \permfoot{http://www.ee.surrey.ac.uk/Teaching/Unix/}
-%
-% \permfoot{http://ss64.com/bash/}
-%\end{fframe}
-%
-%\section{Linux}
-%\begin{frame}
-% \frametitle{Why do people use it?}
-% \begin{itemize}
-% \item Easy to use (point and click, just like in other operating systems).
-% \item Better stability (if something goes wrong, no need to reinstall the
-% whole operating system).
-% \item Secure (originally designed for network servers).
-% \item Practically no Spyware / Addware.
-% \item Practically no viruses.
-% \item Short start up time.
-% \item Less system requirements.
-% \item Free.
-% \end{itemize}
-%\end{frame}
-%
-%\begin{frame}
-% \frametitle{Easy to use}
-%
-% \begin{figure}[]
-% \begin{center}
-% \includegraphics[height=0.8\textheight]{pics/lll-017}
-% \end{center}
-% \caption{}
-% \label{}
-% \end{figure}
-%\end{frame}
-%
-%\begin{frame}
-% \frametitle{Why do we use it?}
-%
-% For large datasets:
-% \begin{itemize}
-% \item Better memory management.
-% \item More flexible to handle larger files.
-% \item Powerful command line tools (\bt{grep}, \bt{sed}, \bt{awk}, \ldots).
-% \item Program development in any language you like (Basic,
-% C$\stackrel{++}{}$, R, Perl, Prolog, \ldots).
-% \end{itemize}
-%
-% Since many NGS applications are still in the development phase, we need to
-% tweak a lot.
-% \bigskip
-%
-% In short: it suits our needs for Next Generation Sequencing.
-%\end{frame}
-%
-%\begin{frame}
-% \frametitle{Other operating systems.}
-%
-% Popular operating systems in the past.
-% \begin{itemize}
-% \item AmigaOS.
-% \item OS/2.
-% \item DOS.
-% \item Mac OS.
-% \item \ldots
-% \end{itemize}
-% \bigskip
-%
-% Operating systems for research purposes:
-% \begin{itemize}
-% \item MINIX.
-% \item Singularity.
-% \end{itemize}
-%\end{frame}
-
\section{Questions?}
\lastpagetemplate
\begin{fframe}
\begin{center}
- Acknowledgements:
\bigskip
\bigskip
-
- Magnus Palmblad
-
- Rob Marissen
+ \bigskip
+ \bigskip
Michiel van Galen
+
+ Jeroen Laros
\end{center}
\vfill
- \permfoot{https://humgenprojects.lumc.nl/trac/humgenprojects/wiki/scripting}
+ \permfoot{https://humgenprojects.lumc.nl/trac/humgenprojects/wiki/NGS-intro}
\end{fframe}
\end{document}
--
GitLab