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  • 5.29_update
  • 5.31_update
  • BIOWDL-208
  • BIOWDL-213
  • BIOWDL-216
  • BIOWDL-232
  • BIOWDL-245
  • BIOWDL-247
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  • BIOWDL-269
  • BIOWDL-271
  • BIOWDL-279
  • BIOWDL-282
  • BIOWDL-292
  • BIOWDL-297
  • BIOWDL-298
  • v5.2.0
  • v5.1.0
  • v5.0.1
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  • v4.0.0
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  • v3.0.0
  • v2.1.0
  • v2.0.0
  • v1.0.0
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  • phhv1reassembly
  • phhv1assembly
37 results
Created with Raphaël 2.2.011Feb10928Jan27261918171411416Dec1514626Nov1715131211109829Oct28130Sep241723Aug20181029Jul2721201998752130Jun2928252221161514111072131May2825211920Apr1514131230Mar29252322191817118424Feb22211918169428Jan21158628Dec24221615119130Nov272625191712111096543230Oct2827262216151312987652129Sep24232116151411109742126Aug2420191817141312111076529Jul2827232221201716151397632130Jun29262524232219update peach to 1.5Speed up CI by using conda caching and only checking changed filesupdate linx to 1.17update purple to 3.2add task for gripss 2.0add a task for PaveAdd an annoying but effective manual checkBIOWDL-583BIOWDL-583Cache correct pathRename workflowUse correct quotesOnly check changed wdl filesremove v parameterRemove newlineGit fetch developSpecifically check originOnly chek files that are different from the base with womtool validateCorrectly use dataSet correct env cache paramAdd lint-evnironmentUse mamba env updateUse cacheAdd missing done statementMerge branch 'develop' into BIOWDL-583Implement all checks in lint.yml directlyUse a separate lint fileadd missing parameter_metaMerge pull request #298 from biowdl/sageupdate healthcheckeradress commentsupdate scripts and changelogMerge remote-tracking branch 'origin/develop' into sageincrease resources GRIDSSHave more records in ramaddPicardDedupaddPicardDedupAdd option to assume sort orderUpdate Picard and reevaluate use of intel inflater/defalerSet xmx value properly for UmiAwareMarkDuplicatesWithMateCigarUse proper encodingUse set_tag call from pysamAdd format parameter to macs2Use more conventional list unpacking for clarity