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Dockerize GATK. Scattering now works with containers. Tabix another docker image.

Merged Dockerize GATK. Scattering now works with containers. Tabix another docker image.
BIOWDL-199 into develop
Merged Ruben Vorderman requested to merge BIOWDL-199 into develop
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@@ -251,7 +251,6 @@ task ScatterRegions {
String outputDirPath = "scatters"
}
command {
set -e -o pipefail
mkdir -p ~{outputDirPath}