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fix somatic tasks and add supporting tasks

Merged Ruben Vorderman requested to merge somatic into develop
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@@ -63,7 +63,6 @@ task Somatic {
@@ -63,7 +63,6 @@ task Somatic {
File? callRegions
File? callRegions
File? callRegionsIndex
File? callRegionsIndex
Boolean exome = false
Boolean exome = false
Boolean rna = false
Int cores = 1
Int cores = 1
Int memory = 4
Int memory = 4
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