- Jan 13, 2020
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Cats authored
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- Oct 02, 2019
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Cats authored
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- Jul 26, 2019
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António Paulo authored
update changelog
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António Paulo authored
Flag description: -M If set, output only candidate somatic -A Indicate to output all variants at the same position. By default, only the variant with the highest allele frequency is converted to VCF -Q float The minimum mapping quality. Defaults to 0 for Illumina sequencing => Using -Q 20 as default -d integer The minimum total depth. Defaults to 5 => Using -d 8 as default -v integer The minimum variant depth. Defaults to 3 => Using -v 4 as default -f float The minimum allele frequency. Defaults to 0.02 Note that "-M" is a soft filter (see https://github.com/AstraZeneca-NGS/VarDictJava/issues/247). This means that there will still be variants with "STATUS=Germline" with a "PASS" filter.
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- Jun 26, 2019
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Ruben Vorderman authored
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- Jun 25, 2019
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Ruben Vorderman authored
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Ruben Vorderman authored
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- Mar 21, 2019
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Cats authored
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- Mar 12, 2019
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Cats authored
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- Mar 05, 2019
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Cats authored
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- Mar 01, 2019
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Cats authored
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- Feb 22, 2019
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Cats authored
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- Sep 12, 2018
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ffinfo authored
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- Sep 10, 2018
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ffinfo authored
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- Aug 10, 2018
- Aug 09, 2018
- Aug 08, 2018
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Cats authored
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- Aug 02, 2018
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Cats authored
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- Jul 30, 2018
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Cats authored
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