Commits · 4795938fabab2a68c7d3d0b17b351aad4e5039ae · biowdl / tasks

May 07, 2018
- add input bam · 89f4ea33
  Ruben Vorderman authored 6 years ago
  
  89f4ea33
May 04, 2018
- added bwa index and samtools fastq · a5d69668
  Ruben Vorderman authored 6 years ago
  
  a5d69668
- add fastq task · b3545b27
  Ruben Vorderman authored 6 years ago
  
  b3545b27
Apr 05, 2018
- link instead of merge if one bam file · f22018df
  Cats authored 6 years ago
  
  f22018df
Mar 12, 2018
- Adding precommands · a4effb10
  Peter van 't Hof authored 7 years ago
  
  a4effb10
Mar 01, 2018
- Added markdup step · 44aeaf02
  Peter van 't Hof authored 7 years ago
  
  44aeaf02
- Fixed sep · b9ab2f02
  pjvan_thof authored 7 years ago
  
  b9ab2f02
- Adding alignment step · f91f5982
  pjvan_thof authored 7 years ago
  
  f91f5982
Jan 31, 2018
- remove pipeline specific command from samtools.wdl · 85cdcf20
  Ruben Vorderman authored 7 years ago
  
  85cdcf20
- add output · 58b232cb
  Ruben Vorderman authored 7 years ago
  
  58b232cb
- add task to get contig with most coverage · 6c2f89bb
  Ruben Vorderman authored 7 years ago
  
  6c2f89bb